PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY45679.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GRAS
Protein Properties Length: 659aa    MW: 72970.9 Da    PI: 6.8704
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY45679.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS359.35.4e-1102856592374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 +++++e+A+avs+g+   a+++L+rls+  +++g++ qRl  ++  AL++r++       +  +p + +e   +e++ +++l+++ sP++ +++++aN 
  GAY45679.1 285 KQTVIEAATAVSEGKYDVASEILTRLSQATNSKGNSEQRLMEHMCSALKSRVNP------HE-NPPPVAELFGKEHAESTQLLYDFSPCFSLGFMAANL 376
                 57899************************************************9......22.33333334599************************* PP

        GRAS 101 aIleavege........ervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                 aIlea+ ++        +++H+iDfdi+qG+Q+++L++aL++R +g+p  +++T+v++  + s+e+l++++++L+++Ae++gv ++fnv ++ +++dl+
  GAY45679.1 377 AILEATMEQttgntigsNKIHVIDFDIGQGGQYMNLFHALSARLNGKPaIVKVTAVAD-GTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLS 474
                 *****988778878888999************************7777699*******.567***************************9999****** PP

        GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErel 289
                  ++L ++p+E+laVn++++l+r++desvs+e++rde+L+ vk+lsP vv++veqe+++n+++F++r+ ea+ yy alfds+e+++ r++++r+kvE+  
  GAY45679.1 475 RDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVEEG- 572
                 **************************************************************************************************. PP

        GRAS 290 lgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk..sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 l+r++ n vaceg++r+er+e ++kWr+r+++aGF+  p+s+ +a+++++ l+  +  + g++v+ee+g +++gW++r+L++vSaWr
  GAY45679.1 573 LSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNrvNPGFTVKEENGGICFGWMGRTLTVVSAWR 659
                 *************************************************99988776789**************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 659 aa     Download sequence    
MSSGFPGGGG GGPDLYSGLA AGGRSITMNG NQLSHQPSYR SSQLPGIFMD QMTSSPQIAN  60
RNLIGKRTFN DYQITHHHHQ QQQQLFQQNH INPAMNSLFL RSVKPRTYQN LSPISPLDFS  120
PNNINNNNNN VLSPDLQQSL PLSHRYNLPL LQQQQQQQQQ PRLYQQLQQQ QHVALVSNTI  180
PYVDNNNTVP SYNNRVQVQG QESEKKMLNR LQELEKQLLD DEEEGDDVSV ITNTNSEWSE  240
TIQNLITFSP KQTVSSIRPL APSPTTSSSS CSSSSVASPA TSCSKQTVIE AATAVSEGKY  300
DVASEILTRL SQATNSKGNS EQRLMEHMCS ALKSRVNPHE NPPPVAELFG KEHAESTQLL  360
YDFSPCFSLG FMAANLAILE ATMEQTTGNT IGSNKIHVID FDIGQGGQYM NLFHALSARL  420
NGKPAIVKVT AVADGTASEE KLKAVRDKLS QVAERVGVCL RFNVAICLKF DDLSRDSLGC  480
EPDETLAVNF AFKLFRMPDE SVSTENPRDE LLRRVKGLSP SVVTLVEQET NTNTAPFMAR  540
VNEACAYYGA LFDSIESTVL RDHSDRVKVE EGLSRKLANS VACEGRDRVE RCEVFGKWRA  600
RMRMAGFELK PMSQIIAESM RTRLSSGNRV NPGFTVKEEN GGICFGWMGR TLTVVSAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.11e-171GRAS family protein