PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY45732.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Protein Properties

Length: 606aa MW: 66868.9 Da PI: 5.5256

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY45732.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	64.3	1.8e-20	128	215	1	83
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 f+k+lt sd++++g +++ +k+a+e+ + ++ +++l +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD +vF GAY45732.1 128 FCKILTASDTSTHGGFSVLRKHATEClppldmTLATP-TQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFL 215 99************************999744433.459*********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 606 aa Download sequence
MAYVEPNFGC SLSSQGGPGS GDLYRELWKA CAGPLVEVPR NGERVYYFPQ GHIEQLEAST 60 NQELTHQEPL FDLPSKILCR VVHIELLAEQ ETDEVYAQIT LHPETDQTEP RSPDQCLPEP 120 PKQTVHSFCK ILTASDTSTH GGFSVLRKHA TECLPPLDMT LATPTQELAA KDLHGYEWRF 180 KHIFRGQPRR HLLTTGWSTF VTSKRLVAGD AFVFLRFTGT IVGVGDFSEQ WPGSKWRSLK 240 IQWDEPATVQ RPERVSPWEI EPFVASAPLN LAQPAVKSKR PRSIDIPASE ITTNSAASAF 300 WYQGSTQSHD ITQVVGATEG QSSESQVVRP MRQKEIDSTI INNSNDCSSR LAPEGIWPSS 360 PHLNVSLNLF PDSTDDHRIV AAQSVLSGYA SSGRPGNTVI HEEVERGKKS EASLGCWLFG 420 IDLKHNSNTA APLGRKVVDP TTGTSGVKGS ARAASDFDAS QNQDLKEVKR GMADVSRKET 480 QNKQGSAAST RTRTKVQMQG IAVGRAVDLT ALKGYDDLFD ELEKMFEIQG QLRPRDKWAV 540 VFTDDEGDMM LAGDDQWPEF CKMVKKIFIY STEEVKNMAT SSKPIASSVE GEGTAISLDS 600 ELKSET

Sequence ? help Back to Top

Protein Sequence Length: 606 aa Download sequence

MAYVEPNFGC SLSSQGGPGS GDLYRELWKA CAGPLVEVPR NGERVYYFPQ GHIEQLEAST  60
NQELTHQEPL FDLPSKILCR VVHIELLAEQ ETDEVYAQIT LHPETDQTEP RSPDQCLPEP  120
PKQTVHSFCK ILTASDTSTH GGFSVLRKHA TECLPPLDMT LATPTQELAA KDLHGYEWRF  180
KHIFRGQPRR HLLTTGWSTF VTSKRLVAGD AFVFLRFTGT IVGVGDFSEQ WPGSKWRSLK  240
IQWDEPATVQ RPERVSPWEI EPFVASAPLN LAQPAVKSKR PRSIDIPASE ITTNSAASAF  300
WYQGSTQSHD ITQVVGATEG QSSESQVVRP MRQKEIDSTI INNSNDCSSR LAPEGIWPSS  360
PHLNVSLNLF PDSTDDHRIV AAQSVLSGYA SSGRPGNTVI HEEVERGKKS EASLGCWLFG  420
IDLKHNSNTA APLGRKVVDP TTGTSGVKGS ARAASDFDAS QNQDLKEVKR GMADVSRKET  480
QNKQGSAAST RTRTKVQMQG IAVGRAVDLT ALKGYDDLFD ELEKMFEIQG QLRPRDKWAV  540
VFTDDEGDMM LAGDDQWPEF CKMVKKIFIY STEEVKNMAT SSKPIASSVE GEGTAISLDS  600
ELKSET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46530.1	1e-109	ARF family protein