PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY45830.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 202aa    MW: 22647.6 Da    PI: 9.3015
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY45830.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.24.2e-18555155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                ++++GVr++  +g+Wv+eIr+p        +r++lg+f tae Aa+a+++a+  ++g
  GAY45830.1  5 KKFRGVRQRQ-WGSWVSEIRHP-----LlkRRVWLGTFETAEAAARAYDQAAVLMNG 55
                59*****999.**********8.....334*********************977765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MVQSKKFRGV RQRQWGSWVS EIRHPLLKRR VWLGTFETAE AAARAYDQAA VLMNGQNAKT  60
NFPILKPNNP EAEGTKGSSY NIPEKGFSEL LNSKLRKCCK DLSPSLTCLR LDNDNSHIGV  120
WQKRAGSRSG SSWVMRVELG KNKKAQNLEN GLPFPSSRSS PTLVDDEVEA GNGREDEDRI  180
AMQMIEELLN WNCPISSPSS EI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11190.15e-71ERF family protein