PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY45913.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TALE

Protein Properties

Length: 447aa MW: 50344.6 Da PI: 5.9734

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY45913.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.2	1.2e-07	388	420	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp++e++++L +++gL+ +q+ +WF N+R + GAY45913.1 388 WPYPTEEDKARLVQETGLQLKQINNWFINQRKR 420 69*****************************87 PP
2	ELK	28.7	2.9e-10	341	362	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ GAY45913.1 341 ELKHELKQGYKEKIVDIREEIL 362 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MAFHHNHLSQ DLPLHHFTDQ QQQQQQQPPS PPQQQHHQHQ QSIETTAPNW LNSALLRSQQ 60 AQQQAAHFSD TNFLNLRTTA NNNNSNNNNT ASDSDASQTP NQWLSRTSSS LLHRNHSDVI 120 DDVTPANDSI IAAVESADLK NANSENMNNA STNNKSEGVV VESGADGVVN WQNARYKAEI 180 LSHPLYEQLL SAHVACLRIA TPVDQLPRID AQLAQSQHVV SKYSALGAGQ GLVTDDKELD 240 QFMTHYVLLL CSFKEQLQQH VRVHAMEAVM ACWEIEQSLQ SLTGVSPGEG TGATMSDDDE 300 DQVDSDANLF DGSLEGPDTM GFGPLIPTES ERSLMERVRQ ELKHELKQGY KEKIVDIREE 360 ILRKRRAGKL PGDTTSVLKS WWQSHSKWPY PTEEDKARLV QETGLQLKQI NNWFINQRKR 420 NWHSNPSTST VLKSKRKSEI PICFEVY

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MAFHHNHLSQ DLPLHHFTDQ QQQQQQQPPS PPQQQHHQHQ QSIETTAPNW LNSALLRSQQ  60
AQQQAAHFSD TNFLNLRTTA NNNNSNNNNT ASDSDASQTP NQWLSRTSSS LLHRNHSDVI  120
DDVTPANDSI IAAVESADLK NANSENMNNA STNNKSEGVV VESGADGVVN WQNARYKAEI  180
LSHPLYEQLL SAHVACLRIA TPVDQLPRID AQLAQSQHVV SKYSALGAGQ GLVTDDKELD  240
QFMTHYVLLL CSFKEQLQQH VRVHAMEAVM ACWEIEQSLQ SLTGVSPGEG TGATMSDDDE  300
DQVDSDANLF DGSLEGPDTM GFGPLIPTES ERSLMERVRQ ELKHELKQGY KEKIVDIREE  360
ILRKRRAGKL PGDTTSVLKS WWQSHSKWPY PTEEDKARLV QETGLQLKQI NNWFINQRKR  420
NWHSNPSTST VLKSKRKSEI PICFEVY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	0.0	TALE family protein