PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY45981.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 94aa    MW: 10716.5 Da    PI: 10.5421
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY45981.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.99.5e-0826542048
                     TTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 20 GggtWktIartmgkgRtlkqcksrwqkyl 48
                     G g+W++ ++  g+ R++k+c++rw +yl
       GAY45981.1 26 GEGCWRSLPKAAGLLRCGKSCRLRWINYL 54
                     5559*********99************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
MGRSPCCEKA KHPTKGMIGS KRLSTGEGCW RSLPKAAGLL RCGKSCRLRW INYLRPDLKR  60
GNFTDEEDEL IIKLHSLLGN KVVIDSREFT RRTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09460.17e-41MYB family protein