PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY46289.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB

Protein Properties

Length: 263aa MW: 30180.9 Da PI: 9.1142

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY46289.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.7	3.1e-19	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll + v++lG g+W+++ar g++R++k+c++rw +yl GAY46289.1 17 KGPWTPEEDKLLTEHVNLLGEGRWSSVARSAGLNRSGKSCRLRWVNYL 64 79********************************************97 PP
2	Myb_DNA-binding	51.6	2.1e-16	70	114	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T++E+ +++++++++G++ W+tIar+++ gRt++++k++w+++ GAY46289.1 70 RGQLTPQEEGIIIELHALWGNK-WSTIARYLP-GRTDNEIKNYWRTH 114 7888****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MMRMMGWGAT TEQGWRKGPW TPEEDKLLTE HVNLLGEGRW SSVARSAGLN RSGKSCRLRW 60 VNYLRPGLKR GQLTPQEEGI IIELHALWGN KWSTIARYLP GRTDNEIKNY WRTHFKKEKS 120 SQKQEKRKAL LLKQKQQQQK QQQQHEDNMN RVSSNDEKTM STAEHEKQMA FMQPAMAMEN 180 QSWPTMYQDI ASWPSDHHQP AVIDELGLWG GLWTFDDTNG RVDASTNCNK MAAAVQQNQA 240 ATFALGGDSS NFCNGGYIFQ EGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30210.1	3e-68	MYB family protein