PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY46586.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB

Protein Properties

Length: 264aa MW: 31087 Da PI: 9.3938

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY46586.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.1	2.3e-19	21	68	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll+++v+++G g+W+++ar g++R +k+c++rw +yl GAY46586.1 21 KGPWTAEEDRLLIEYVRLHGEGRWNSVARLAGLRRNGKSCRLRWVNYL 68 79********************************************97 PP
2	Myb_DNA-binding	51.8	1.9e-16	74	118	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T+ E+ +++++++++G++ W+tIar ++ gRt++++k++w+++ GAY46586.1 74 RGQITPHEESIILELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 118 7888****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MSWGMMGAQM GWGIIDEGWR KGPWTAEEDR LLIEYVRLHG EGRWNSVARL AGLRRNGKSC 60 RLRWVNYLRP DLKRGQITPH EESIILELHA RWGNRWSTIA RSLPGRTDNE IKNYWRTHFK 120 KKAKISSDNT DKAKNRLLKR QQFHQQQQHQ HQHQHQQQDM QLNQLDLKRI MFLLDESEHR 180 VPYIPQAPRP EFMGYHPNTI TDQDQQANNF FYNWMPNGNN NSAIMTEPSN EEILWDGLWN 240 LDDFGAAACA TSKASFHNLV APFC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24310.1	4e-92	MYB family protein