PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY46753.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB

Protein Properties

Length: 217aa MW: 24741.6 Da PI: 7.9495

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY46753.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.7	6.2e-14	21	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd+llvd+vk +G+g+W++ ++R++k+c++rw +yl GAY46753.1 21 KGLWTVEEDKLLVDYVKVHGKGQWNR------LKRCGKSCRLRWMNYL 62 678*********************......78**********97 PP
2	Myb_DNA-binding	63.3	4.6e-20	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eEd+l+++++k+lG++ W++Ia++++ gRt++q+k++w+++l GAY46753.1 68 RGNFTEEEDDLIIRLHKLLGNR-WALIAKRVP-GRTDNQVKNYWNSHL 113 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence
MTKTKAKEGQ EEKHDDQYYK KGLWTVEEDK LLVDYVKVHG KGQWNRLKRC GKSCRLRWMN 60 YLSPNVNRGN FTEEEDDLII RLHKLLGNRW ALIAKRVPGR TDNQVKNYWN SHLSKKLGIK 120 DQTRGVGDSP SLTQSQKIQP ITDQNANAII DPCDENTKSY SIDNGTQKAV NVSGSGTQES 180 NTTDESFINS LWNSCDDDLD LGTFFTMKGF VDGYSLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14750.1	9e-73	MYB family protein