PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY46933.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TCP

Protein Properties

Length: 266aa MW: 27597.8 Da PI: 10.3894

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY46933.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	122.8	3.9e-38	31	127	2	97
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg......kaaksa 94 ++kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++ ++s s+ ++ +s + + + GAY46933.1 31 TVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFS-TVSVSVRGGGNSTSlsstvsS----S 124 689*************************************************************99999777.333333333222223322221....2 PP TCP 95 aks 97 a s GAY46933.1 125 AIS 127 222 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MSNSDGATNG VSNGAIIDPQ RQQPPGNGAL TVKKPPSKDR HSKVDGRGRR IRMPIICAAR 60 VFQLTRELGH KSDGQTIEWL LRQAEPSIIA ATGTGTTPAS FSTVSVSVRG GGNSTSLSST 120 VSSSAISAAL EHKPSLGPAP FILGKRVRSD DDGTKGEDSI SAVGPATVGP IVGPATPGGG 180 FWALPARPDF GQVWSFAAAA APEMVVQAAS QQQHHHHQQP HQLFMQQAMG EASAARVGNY 240 LPGHLNLLAS LSGGPGSSGR REEDPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	2e-70	TCP family protein