PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY47022.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bZIP

Protein Properties

Length: 417aa MW: 45773.3 Da PI: 6.7031

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY47022.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	30.9	6.1e-10	179	217	4	39
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLe 39 k+ rr+++NReAAr+sR+RKka++++Le+ + ++Le GAY47022.1 179 QKALRRLAQNREAARKSRLRKKAYVQQLENsrlRLAQLE 217 5889*************************8333444444 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MQSFKPPHIN PDVFCHSSLF LRGIDENSRN QARFADLGEL EQQPFHNHVD LSPSSMFSLK 60 SNNITVASNI TVASNNLHYN TLSSSIGCAT DTVATTGAAA GGCLDTGQFM FQKGTTIGSS 120 LGSGHIENWG ESGIGDNSQQ TDTSTDVDTD DKNQVNGVRR GVPIVTGSME QSKIKTGDQK 180 ALRRLAQNRE AARKSRLRKK AYVQQLENSR LRLAQLEQEL QRARQQGIFI ATGVSGDIGH 240 SVAGNGVLAF DLDYVHWVDE HQRLINDLRS AVNSSMGDNE LRHLVDGVMA HYEEVFQLKS 300 IGTKADVFHM LSGMWKTPVE RCFMWLGGFR SSELLKVIGN HLEPLTDQQL MGICNLQQSS 360 QQAEDALSQG MEALQQSLVD TLSASSLGPT TARALLVIND YTSRLRALSS LWLARPR

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MQSFKPPHIN PDVFCHSSLF LRGIDENSRN QARFADLGEL EQQPFHNHVD LSPSSMFSLK  60
SNNITVASNI TVASNNLHYN TLSSSIGCAT DTVATTGAAA GGCLDTGQFM FQKGTTIGSS  120
LGSGHIENWG ESGIGDNSQQ TDTSTDVDTD DKNQVNGVRR GVPIVTGSME QSKIKTGDQK  180
ALRRLAQNRE AARKSRLRKK AYVQQLENSR LRLAQLEQEL QRARQQGIFI ATGVSGDIGH  240
SVAGNGVLAF DLDYVHWVDE HQRLINDLRS AVNSSMGDNE LRHLVDGVMA HYEEVFQLKS  300
IGTKADVFHM LSGMWKTPVE RCFMWLGGFR SSELLKVIGN HLEPLTDQQL MGICNLQQSS  360
QQAEDALSQG MEALQQSLVD TLSASSLGPT TARALLVIND YTSRLRALSS LWLARPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68640.1	1e-120	bZIP family protein