PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY47610.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 237aa    MW: 25863.8 Da    PI: 7.0864
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY47610.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.41.4e-1482127454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  hn+ ErrRRdriN+++  L+el+P++      K + a++L  Av+Y+k L
  GAY47610.1  82 VHNQSERRRRDRINKRLKSLKELVPNC-----NKSDRASVLDDAVNYVKAL 127
                 5*************************8.....699**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MNNQVPWNFS VASGDSEKGQ SSGNENSFDF LESSASQLPT SWHQTSHSLD TDVDDFSDAT  60
EISEGMERKP DNRPKRTHSA EVHNQSERRR RDRINKRLKS LKELVPNCNK SDRASVLDDA  120
VNYVKALRHQ LEMMSAQGGA IFQSPFMSPS GHQSTEVPQI SPNVPISPKL GMGSGIGTGM  180
VDVLFSWSSR DIIGSLGQSA SFISSRCRLA TNACIQKSCS LSNANAMCSF TTLASIC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18792ERRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.29e-20bHLH family protein