PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY47631.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

ARR-B

Protein Properties

Length: 445aa MW: 49716.8 Da PI: 5.4357

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY47631.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	66.2	5.7e-21	251	300	1	51
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 kpr++Wt+eLH +F+eav++L G kA Pk il+ m+v+gLt +v+SHLQ GAY47631.1 251 KPRIVWTSELHLKFIEAVSSL-GDIKARPKLILQKMNVPGLTQRQVASHLQ 300 79*****************.8999*********************** PP
2	Myb_DNA-binding	34.6	4.4e-11	255	300	3	45
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwq 45 WT e+++++++av lG ++k+I ++m+ g+t q+ s++q GAY47631.1 255 VWTSELHLKFIEAVSSLGDIkaRPKLILQKMNvPGLTQRQVASHLQ 300 6***************66**********************98 PP
3	Response_reg	26.9	2.4e-10	3	81	29	107
ESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHH CS Response_reg 29 addgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeel 107 ++ ++ al l+++++ ++l++ ++++++d l +++ + +ee +pii+++++ +e +al Ga fl+Kp++ ++l GAY47631.1 3 TELASVALSLIRKEKdrFELVMANVDISNIDSLSFVRVLVKEE--IPIILMSSRRNEIFSWRALVEGACFFLEKPISFDDL 81 56677889999777778********************9988..******************************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
TTTELASVAL SLIRKEKDRF ELVMANVDIS NIDSLSFVRV LVKEEIPIIL MSSRRNEIFS 60 WRALVEGACF FLEKPISFDD LKYVWQHSYI YKRRSQIQLE DARKPEQEIL LNRGNISQGK 120 RINEGGDDVS RNIANASATD DLRYSINTDQ NEKNNKQMEV DAQVHIFDEN SVKESQNACN 180 MEQHLVMAND QIQEQGGLIK TKRSLDDDRG GEKKRNLNSD NENSNSFMVP TEETGKEMNE 240 NNNGHVKKKR KPRIVWTSEL HLKFIEAVSS LGDIKARPKL ILQKMNVPGL TQRQVASHLQ 300 ISDNVIRDLS SNTGSLQTLE RIKPSVVGQP TLNSNDFAAA GKTQGAGTVQ VENASGISSN 360 VANSGKSLKQ FSEGNQEVKA IAVLEPPAAS SVNAGKSAYA ALLKFLDEDE EEIRAGLGGE 420 LKPADLDRYC EWLREALMEK SEHSE

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

TTTELASVAL SLIRKEKDRF ELVMANVDIS NIDSLSFVRV LVKEEIPIIL MSSRRNEIFS  60
WRALVEGACF FLEKPISFDD LKYVWQHSYI YKRRSQIQLE DARKPEQEIL LNRGNISQGK  120
RINEGGDDVS RNIANASATD DLRYSINTDQ NEKNNKQMEV DAQVHIFDEN SVKESQNACN  180
MEQHLVMAND QIQEQGGLIK TKRSLDDDRG GEKKRNLNSD NENSNSFMVP TEETGKEMNE  240
NNNGHVKKKR KPRIVWTSEL HLKFIEAVSS LGDIKARPKL ILQKMNVPGL TQRQVASHLQ  300
ISDNVIRDLS SNTGSLQTLE RIKPSVVGQP TLNSNDFAAA GKTQGAGTVQ VENASGISSN  360
VANSGKSLKQ FSEGNQEVKA IAVLEPPAAS SVNAGKSAYA ALLKFLDEDE EEIRAGLGGE  420
LKPADLDRYC EWLREALMEK SEHSE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	247	252	KKKRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	1e-18	ARR-B family protein