PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY47706.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NF-YB

Protein Properties

Length: 186aa MW: 20182.6 Da PI: 7.0602

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY47706.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	183.5	1.7e-57	25	120	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 reqdr lPianvsrimkk+lPanakiskdaketvqecvsefisfvt+easdkcqrekrktingddllwa++tlGfe+yveplkvyl+++re+egek GAY47706.1 25 REQDRSLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGEK 120 89********************************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 186 aa Download sequence
MGDSDNDSGG ERERQHGSSR ELSPREQDRS LPIANVSRIM KKALPANAKI SKDAKETVQE 60 CVSEFISFVT GEASDKCQRE KRKTINGDDL LWAMTTLGFE EYVEPLKVYL QRFREMEGEK 120 MARDKDAPPG HGVGGAIGGE YGGMMMMGHG GQLNQGNVYG SGGFHHQMAM SSKGGPTSGG 180 SLGRPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	4e-70	NF-YB family protein