PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY47713.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NF-YB

Protein Properties

Length: 171aa MW: 18898.3 Da PI: 6.5109

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY47713.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	152.3	9.2e-48	1	90	8	97
NF-YB 8 lPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +Pianv+rim+++lP +akis+daketvqecvse+isf+t+ea+++c+re+rkti+++d++wa+++lGf++yvepl+++l+++r+ e e+ GAY47713.1 1 MPIANVIRIMRRILPPHAKISDDAKETVQECVSEYISFITGEANERCHREQRKTITAEDVVWAMGKLGFDNYVEPLSLFLNRFRDSEHER 90 8*************************************************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 171 aa Download sequence
MPIANVIRIM RRILPPHAKI SDDAKETVQE CVSEYISFIT GEANERCHRE QRKTITAEDV 60 VWAMGKLGFD NYVEPLSLFL NRFRDSEHER TAAQHNEPIP MPRRGPSVDY GLFGLPPGPF 120 GPVFNMGPQQ GVFDPSIGGF LREGSGSGSG SSSQATGHNH LPGFDPFAQF K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21970.1	5e-54	NF-YB family protein