PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY47885.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB_related

Protein Properties

Length: 555aa MW: 62471.1 Da PI: 4.5919

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY47885.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.2	1.1e-09	489	544	1	47
TSSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqky 47 r+ WT+eE+e l+++v+++ ++ Wk++ + +Rt+ ++k++w++ GAY47885.1 489 RLHWTAEEEEMLKEGVEKFSTKvnknlPWKKVLEFGCdvfdPTRTPSDLKDKWRNI 544 789***************************99877***************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 555 aa Download sequence
MNGDVDMASA YNDDEIGIHI ENHSGLGRSG DFMDVDFLEE EPCIKCNRRG ENLLVCSQSG 60 CPISVHENCL SCGVKFDDVG NFYCPYCWYK RELTRTKELW KKAMETKKQL ACFIDSKSFS 120 GDKKKENCRT DKGNELNMSS LHQERNYSYG GCEDRRDDVQ VKNLSEEVEG ELENDGDNTK 180 TADSCDKFKR ALENQSNLLA VHSHTGDKIN HGREKTPGIE SLVNYTSKER PNEENVCETH 240 ELELLEDGKG IPLEDLGCDD DSGREDNVCE THELELLEDG EGIPLEDLGC NDDSGHEENV 300 CETHELELLE DGEGIPLEDL GCVDGSGHEK IAEDQLQEEP YTACCVGEEF VVDILLNLWK 360 GDIPDTEKLK EERREEEENV DPTTLRTEMS DSDIEPTSMR LRCVAGSSKK AQSRGVDSPR 420 KLRSSKGANP KKTKSQNVDS SKKLSPPKGA NSEKIAQARN EKSTASKKST QVSGGKFTNF 480 TFASEKRRRL HWTAEEEEML KEGVEKFSTK VNKNLPWKKV LEFGCDVFDP TRTPSDLKDK 540 WRNIMSRESS AISRK

Sequence ? help Back to Top

Protein Sequence Length: 555 aa Download sequence

MNGDVDMASA YNDDEIGIHI ENHSGLGRSG DFMDVDFLEE EPCIKCNRRG ENLLVCSQSG  60
CPISVHENCL SCGVKFDDVG NFYCPYCWYK RELTRTKELW KKAMETKKQL ACFIDSKSFS  120
GDKKKENCRT DKGNELNMSS LHQERNYSYG GCEDRRDDVQ VKNLSEEVEG ELENDGDNTK  180
TADSCDKFKR ALENQSNLLA VHSHTGDKIN HGREKTPGIE SLVNYTSKER PNEENVCETH  240
ELELLEDGKG IPLEDLGCDD DSGREDNVCE THELELLEDG EGIPLEDLGC NDDSGHEENV  300
CETHELELLE DGEGIPLEDL GCVDGSGHEK IAEDQLQEEP YTACCVGEEF VVDILLNLWK  360
GDIPDTEKLK EERREEEENV DPTTLRTEMS DSDIEPTSMR LRCVAGSSKK AQSRGVDSPR  420
KLRSSKGANP KKTKSQNVDS SKKLSPPKGA NSEKIAQARN EKSTASKKST QVSGGKFTNF  480
TFASEKRRRL HWTAEEEEML KEGVEKFSTK VNKNLPWKKV LEFGCDVFDP TRTPSDLKDK  540
WRNIMSRESS AISRK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	486	490	KRRRL