PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY48048.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TALE

Protein Properties

Length: 379aa MW: 43303.1 Da PI: 6.4611

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY48048.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.3	3.1e-09	305	340	20	55
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ LA+++gL+++q+ +WF N+R ++ GAY48048.1 305 YKWPYPSETEKVALAESTGLDQKQINNWFINQRKRH 340 4679*****************************885 PP
2	ELK	37.8	3.9e-13	260	281	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++LlrKYsgyL+sLkqE+s GAY48048.1 260 ELKNHLLRKYSGYLSSLKQELS 281 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MEGYNSLNEN TTPRGNFLYS SSQVVGSSAY GRASDGQMPI RSNSSNSFHL QSGGSTCFQS 60 ERAPPPEAHT HHPTIVKTEA STSQLIYSLN MMREGHHHHH QSQQEGNESS ETEAIKAKII 120 SHPQYSSLLE AYVDCQKVGA PPEVVARLAA ARQEFESRQR SSLNSRDSTN KDPELDQFME 180 AYYDMLVKYR EELTRPIQEA MDFIRRIETQ LNMLSNGPVR IFNSTDDQKC EGVGSSEEDQ 240 ENSGGETELP EIDPRAEDRE LKNHLLRKYS GYLSSLKQEL SKKKKKGKLP KEARQKLLNW 300 WELHYKWPYP SETEKVALAE STGLDQKQIN NWFINQRKRH WKPSEDMQFM VMDGLHPQNA 360 ASLYMDGHYM ADGPYRLGP

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MEGYNSLNEN TTPRGNFLYS SSQVVGSSAY GRASDGQMPI RSNSSNSFHL QSGGSTCFQS  60
ERAPPPEAHT HHPTIVKTEA STSQLIYSLN MMREGHHHHH QSQQEGNESS ETEAIKAKII  120
SHPQYSSLLE AYVDCQKVGA PPEVVARLAA ARQEFESRQR SSLNSRDSTN KDPELDQFME  180
AYYDMLVKYR EELTRPIQEA MDFIRRIETQ LNMLSNGPVR IFNSTDDQKC EGVGSSEEDQ  240
ENSGGETELP EIDPRAEDRE LKNHLLRKYS GYLSSLKQEL SKKKKKGKLP KEARQKLLNW  300
WELHYKWPYP SETEKVALAE STGLDQKQIN NWFINQRKRH WKPSEDMQFM VMDGLHPQNA  360
ASLYMDGHYM ADGPYRLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-146	TALE family protein