PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY48206.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 305aa    MW: 35099.9 Da    PI: 6.871
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY48206.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.21.1e-5191321127
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 lppGfrFhPtdeelv++yL++k++g ++++  +i+e+d+yk++Pw+Lp++++ +ekewyfFs+rd+ky++g+r+nra+ sgyWkatg +k++ +   ++
  GAY48206.1   9 LPPGFRFHPTDEELVNHYLCRKCAGLPISV-PIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGAEKPIGK--PKT 104
                 79****************************.88***************8888899*************************************98..778 PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyr 127
                  g+kk Lvfy g+apkg kt+W+mheyr
  GAY48206.1 105 LGIKKALVFYAGKAPKGIKTNWIMHEYR 132
                 ***************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MMKGAELELP PGFRFHPTDE ELVNHYLCRK CAGLPISVPI IAEIDLYKYD PWELPEMARY  60
GEKEWYFFSP RDRKYPNGSR PNRAAGSGYW KATGAEKPIG KPKTLGIKKA LVFYAGKAPK  120
GIKTNWIMHE YRPANVHRSP ATKNNLRLDD WVLCRLYNKK GRMEKHYPSD QKSIGFPELE  180
EDRKPNINIS RQEVALGMPP HQGSPVPMMN DLLNMDTSDS VPRLQTDSSC SEHVLSPEIA  240
CDKEVQSVPK WNDLGNALND DYNQFSFNYM DTNSFQDDPF GPQVQYQMDQ LSPYQDLFMI  300
LQKPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-123NAC family protein