PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY48207.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 249aa    MW: 28631.4 Da    PI: 8.7044
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY48207.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM94.61.5e-2957654127
         NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                 +ekewyfFs+rd+ky++g+r+nra+ sgyWkatg +k++ +   ++ g+kk Lvfy g+apkg kt+W+mheyr
  GAY48207.1   5 GEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGAEKPIGK--PKTLGIKKALVFYAGKAPKGIKTNWIMHEYR 76 
                 689************************************98..778***************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MARYGEKEWY FFSPRDRKYP NGSRPNRAAG SGYWKATGAE KPIGKPKTLG IKKALVFYAG  60
KAPKGIKTNW IMHEYRPANV HRSPATKNNL RLDDWVLCRL YNKKGRMEKH YPSDQKSIGF  120
PELEEDRKPN INISRQEVAL GMPPHQGSPV PMMNDLLNMD TSDSVPRLQT DSSCSEHVLS  180
PEIACDKEVQ SVPKWNDLGN ALNDDYNQFS FNYMDTNSFQ DDPFGPQVQY QMDQLSPYQD  240
LFMILQKPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.13e-87NAC family protein