PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY48281.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

CPP

Protein Properties

Length: 500aa MW: 54013.6 Da PI: 8.3266

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY48281.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	46.9	5.7e-15	61	100	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnC++s+Clk+YCeCfaag +C+ C+C +C+N+ e+ GAY48281.1 61 KQKQCNCRNSRCLKLYCECFAAGIYCDG-CNCVNCHNNVEH 100 89************************.******9876 PP
2	TCR	51.3	2.3e-16	145	184	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+C+C dCkN e GAY48281.1 145 KHNKGCHCKKSGCLKKYCECFQANILCSENCRCLDCKNFE 184 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 500 aa Download sequence
MRSPSQAMPQ WQARPQHVRM VNRVPHPVHK LPLPTLPPGK QESPRSRPRA NTDGKDGTPK 60 KQKQCNCRNS RCLKLYCECF AAGIYCDGCN CVNCHNNVEH EVARQEAVGA TLERNPNAFR 120 PKIASSPHGA QDAREDAREA QLAAKHNKGC HCKKSGCLKK YCECFQANIL CSENCRCLDC 180 KNFEGSEERR ALFHGDHNGI AFMQRAANAA IIGAVGSSGY GTLMTSNKRK SEELLFGVAA 240 KDQSVIRNPQ SQQGNNVQNS AVPCSQSVPV SQTANASVLG STKSALRSPL ADILQPQDMK 300 ELCSLLVMVS SEATKTLTKK VGAMQTEREG SRSSVASPIQ EGEDSRKGHE VHNGIPDDRQ 360 SGNQMDVDGT SGSGSDGGDM LNERPLSPGT RALMCDEEDS AFMQAGPQTG LAKTMCSPLV 420 KSETRSQQKA VEDGTSRSGT EVRGYMEPCG YGSAKSAVSV TLEPSCTTTS VSSRQNNDLP 480 MRVGLSNGQR VVDSEIRNRN

Sequence ? help Back to Top

Protein Sequence Length: 500 aa Download sequence

MRSPSQAMPQ WQARPQHVRM VNRVPHPVHK LPLPTLPPGK QESPRSRPRA NTDGKDGTPK  60
KQKQCNCRNS RCLKLYCECF AAGIYCDGCN CVNCHNNVEH EVARQEAVGA TLERNPNAFR  120
PKIASSPHGA QDAREDAREA QLAAKHNKGC HCKKSGCLKK YCECFQANIL CSENCRCLDC  180
KNFEGSEERR ALFHGDHNGI AFMQRAANAA IIGAVGSSGY GTLMTSNKRK SEELLFGVAA  240
KDQSVIRNPQ SQQGNNVQNS AVPCSQSVPV SQTANASVLG STKSALRSPL ADILQPQDMK  300
ELCSLLVMVS SEATKTLTKK VGAMQTEREG SRSSVASPIQ EGEDSRKGHE VHNGIPDDRQ  360
SGNQMDVDGT SGSGSDGGDM LNERPLSPGT RALMCDEEDS AFMQAGPQTG LAKTMCSPLV  420
KSETRSQQKA VEDGTSRSGT EVRGYMEPCG YGSAKSAVSV TLEPSCTTTS VSSRQNNDLP  480
MRVGLSNGQR VVDSEIRNRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-117	CPP family protein