PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY48330.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 228aa    MW: 25154.9 Da    PI: 4.8334
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY48330.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.67.6e-194292155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                + y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  GAY48330.1 42 PVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALSIKG 92
                68*****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MSEPQNSSEA ESSSSNSSLS PTNAHQDSKK IKRMRDQSSK HPVYRGVRMR NWGKWVSEIR  60
EPRKKSRIWL GTFPTPEMAA RAHDVAALSI KGNSAILNFP ELADSLPRPN SLAPRDVQAA  120
AAKAAQMDKF DSSSSSSLSS LVSAMDLSTG SEELSEIVEL PSLGSSYDYK SSELRNEFVF  180
VDSVDGWMYT PPWFQSVEVE DYQFGVLPES SVFSSTNFGL GEGLLWDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.19e-79ERF family protein