PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY48356.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family HB-other
Protein Properties Length: 254aa    MW: 29327 Da    PI: 6.6704
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY48356.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox171e-051372552
                SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHHH CS
    Homeobox  5 ttftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNrR 52
                t ftk++le +e+lF +  +  +s+e  +++Ak+            ++ + V+ WFq r 
  GAY48356.1 13 TGFTKTELEKMEKLFMEskDDLLSKEFCQKIAKSFscsagragkpVVKWTEVQSWFQSRQ 72
                569*************755889*********************999***********886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MDRLRPRQRS VFTGFTKTEL EKMEKLFMES KDDLLSKEFC QKIAKSFSCS AGRAGKPVVK  60
WTEVQSWFQS RQQDRPTKVT SSTNESKKGS DLPDACPPIK EHGSSQEPRG EKVPDVSEME  120
FEARSSKDGA WYDVDMFLAH RFLDCGEAEV RVRFVGFGAD EDEWVNVKNA VRERSVPLEP  180
SDCHKLKVGG HVLCFQERRD QGIHYDAHIA EIHRRMHDIR GCRCLFLVRY NHDNTEARES  240
SFEEIMLQAN VLDH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18380.21e-59HB-other family protein