PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY48386.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family FAR1
Protein Properties Length: 292aa    MW: 32558.4 Da    PI: 4.976
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY48386.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR154.34.6e-17141213276
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkw 76 
                 +Y++YA   GFs+rk+  +ks+ ng +++r+++C+++g+r +++++  + r++r+etrtgC a++++ ++ +g +
  GAY48386.1 141 CYSRYAVLEGFSIRKDFVNKSRINGVVVSRRYTCYRQGYRPTKHSA--NLRKPRQETRTGCLAHMTIARQPNGMF 213
                 7****************************************99988..99******************9988765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
LMDSCEADMS SQLPEEDGKN ELQMSLRMDV DEGQERENSK DCSVGKSSES TNTECNCQSP  60
SASSINKSLM EIHGEEYQTL GISSAYKSET EVVDGEGESH TSEVSSSDVF GGGVVVKDEE  120
VTYVIPTVGM EFETEDHAYK CYSRYAVLEG FSIRKDFVNK SRINGVVVSR RYTCYRQGYR  180
PTKHSANLRK PRQETRTGCL AHMTIARQPN GMFQTFFIFL FPFSPSNPNG IVPFACLNKT  240
VTVLLVSHQR CTLDPGDIYA TRFDITAPYK NTGEVIETFQ KMKGMLGNSV QP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.11e-14FAR1 family protein