PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY48497.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 919aa MW: 102346 Da PI: 7.5778

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY48497.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	31	8.2e-10	432	502	18	91
FAR1 18 kskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +++k+ +++ ++ +tf C ++ k e+++ + + +++++ + gC+ak+ ++++gkw++ +l+l+HnH l+p GAY48497.1 432 RTTKKGTDEIVKYATFACGRSDKLERKSVN---ALKPKPNVKNGCDAKIGGCLNEEGKWVLRTLNLQHNHGLSP 502 34455577888999**999988887766...999*********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 919 aa Download sequence
METIHVKEST IIRPAQETPR HSLRLSDLDL LMPASHIPSV YFYRRPNYPC NFFEGGLLKE 60 ALSKVLVPFY PLAGRLGKDE NGRIEIKCKG EGVLFIEAET SCVTDDFGDF ESSSKLVQLV 120 PPVDRTKDAC FHPLIMAQVT HFKCGGVSLG LMMHHTSMDG TTAYHFMNSW AEMTRGIPIS 180 VPPIFDRTIL DVGVSTSPSF HHIEYDPPPS MNTPTQNPQA ISTAILKLSP DQMNILKEKS 240 KGDHGSTVKY TRFEIVAAHI WRCACKARGL SIDQATKLEI PTSGRFKLNP KIPLGYCGNV 300 NFSATPMALS GDIQSESLNC TTERIHEAIK LRDDKYMKSG LAYLKQQPDL TVIRRDPKII 360 NCPNLLITKV ADMPMYEVDF GWGRPVFTTP WAAVDGEIFI LPGPTNDGSW LVVVDMETNH 420 LQHFNKVPVK VRTTKKGTDE IVKYATFACG RSDKLERKSV NALKPKPNVK NGCDAKIGGC 480 LNEEGKWVLR TLNLQHNHGL SPDKARHCLR LSDLDLLMPA SHIPSVYFYR RPNYPSNLFE 540 GGLLKEALSK VLVPFHPLAG RLGKDENGRI EIKCNGKGVL FIEAETSCVT DDFGDFESCL 600 KLVQLVPPVD RTKDAYFHPL IMAQVTHFKC GGVSLGLMMH HLPMDGTTAY HFMNSWAEMS 660 RGIPISVPPI FDRTILDVGV PTSPSFHHIE HDPPPFMNSP TQNPQAISTA ILKLSPDQMS 720 ILKEKSKGDH GSTVKYTRFE IVAAHIWRCA CKARGLSVDQ ATKLDIPTSG RFKLNPKIPF 780 GYCGNVGFST TPMALSGDIQ SESLNCTTER IHEALKMTDD KYMKSGHAYL KQQPDLTVIR 840 RDAEISNCPN LLITKLADMP MYEVDLGWSR PVFTMPVSGV DGEVFILPGP TNDGSWSVAV 900 GMETSHLQHF DKFFYDIFP

Sequence ? help Back to Top

Protein Sequence Length: 919 aa Download sequence

METIHVKEST IIRPAQETPR HSLRLSDLDL LMPASHIPSV YFYRRPNYPC NFFEGGLLKE  60
ALSKVLVPFY PLAGRLGKDE NGRIEIKCKG EGVLFIEAET SCVTDDFGDF ESSSKLVQLV  120
PPVDRTKDAC FHPLIMAQVT HFKCGGVSLG LMMHHTSMDG TTAYHFMNSW AEMTRGIPIS  180
VPPIFDRTIL DVGVSTSPSF HHIEYDPPPS MNTPTQNPQA ISTAILKLSP DQMNILKEKS  240
KGDHGSTVKY TRFEIVAAHI WRCACKARGL SIDQATKLEI PTSGRFKLNP KIPLGYCGNV  300
NFSATPMALS GDIQSESLNC TTERIHEAIK LRDDKYMKSG LAYLKQQPDL TVIRRDPKII  360
NCPNLLITKV ADMPMYEVDF GWGRPVFTTP WAAVDGEIFI LPGPTNDGSW LVVVDMETNH  420
LQHFNKVPVK VRTTKKGTDE IVKYATFACG RSDKLERKSV NALKPKPNVK NGCDAKIGGC  480
LNEEGKWVLR TLNLQHNHGL SPDKARHCLR LSDLDLLMPA SHIPSVYFYR RPNYPSNLFE  540
GGLLKEALSK VLVPFHPLAG RLGKDENGRI EIKCNGKGVL FIEAETSCVT DDFGDFESCL  600
KLVQLVPPVD RTKDAYFHPL IMAQVTHFKC GGVSLGLMMH HLPMDGTTAY HFMNSWAEMS  660
RGIPISVPPI FDRTILDVGV PTSPSFHHIE HDPPPFMNSP TQNPQAISTA ILKLSPDQMS  720
ILKEKSKGDH GSTVKYTRFE IVAAHIWRCA CKARGLSVDQ ATKLDIPTSG RFKLNPKIPF  780
GYCGNVGFST TPMALSGDIQ SESLNCTTER IHEALKMTDD KYMKSGHAYL KQQPDLTVIR  840
RDAEISNCPN LLITKLADMP MYEVDLGWSR PVFTMPVSGV DGEVFILPGP TNDGSWSVAV  900
GMETSHLQHF DKFFYDIFP