PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY49273.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family WOX
Protein Properties Length: 162aa    MW: 18576.8 Da    PI: 6.5216
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY49273.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.18.4e-202282257
                T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                r+R+t+t+ ql++Le ++ + + +p ++++++++++l    +++e++V++WFqNrRa+ k+
  GAY49273.1 22 RQRWTPTPAQLQILEHVYDEcKGTPRKQKIQDMTAELakhgQISETNVYNWFQNRRARLKR 82
                89*****************9889***********************************997 PP
2Wus_type_Homeobox94.11.2e-302184265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       ar+RWtPtp Q++iLe++y++   tP k++iq++taeL+++G+i+++NV++WFQNr+aR ++kq
         GAY49273.1 21 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 84
                       789***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MRMGNPYFDP FVASGSQKLT ARQRWTPTPA QLQILEHVYD ECKGTPRKQK IQDMTAELAK  60
HGQISETNVY NWFQNRRARL KRKQSGVVPN NAESEAETVT HAESRKQNPE SIQSLEDSAP  120
PPRDEDIYPQ SPDLGIDQMI GKMEIPGSFS FHWQVDRYDM LG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17684RRARLKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.14e-44WOX family protein