PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY49346.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 767aa MW: 87576.6 Da PI: 7.1374

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY49346.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	98.3	8.3e-31	71	158	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA+++GFs+r+s ++s+r+g+i++r+ vCs+eg+r+ ++++ +++r+r+ tr+gCka+++vkk+ +gkw v+kl +eHnHel+p GAY49346.1 71 FYNSYARRIGFSTRVSVYQRSRRDGSIICRQIVCSREGFRRGSSEN--RSKRQRTITRVGCKAQMTVKKQGSGKWAVSKLIKEHNHELVP 158 9***************************************9988..999***********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 767 aa Download sequence
MEFEPLDIEN GVIEFDEMRN SNGEDDSERP SDYYDHVLPD NSRNFETLNG DPNLEPFEGM 60 EFDSEQAARI FYNSYARRIG FSTRVSVYQR SRRDGSIICR QIVCSREGFR RGSSENRSKR 120 QRTITRVGCK AQMTVKKQGS GKWAVSKLIK EHNHELVPPD KVHCLRSHRH VSGPARSLID 180 TLQAAGMGPS GVMSVLIKES GGVNNVGFTK VDCQNYMSSS RQRTLGSGGQ VVIDNLKQMQ 240 AEDPSFFCAF QGDFENTTGN IFWADANSRM NYSYFGDTVT FDTTYRMNRY RIPFAPFTGL 300 NHHGQPVLFG CALLLNESEA SFIWLFEAWL AAMSGRSPNS ITTDQDRIIR AAVAQVFPGT 360 RHRFCKWNVF REAQERLSDV YQSHPHFEAE FQRCINMTET VDEFESCWES LIRRYNLVGN 420 EWLQSMYNVR QQWVPVYLRD TFFGEMSMTQ ASDNINSYFD GYINASTNIQ ALIKQYEKAI 480 ASRHEKEVKA DYDTVNTEPV LKTPSPMEKQ VANLYTRKIF MKFQEELVET LAYPATIVND 540 TGSEIIYRVA KFGEEQKAHF VRYNIFEKKA SCSCQLFEFS GIICRHILAV FRVTNILTLP 600 SHYILKRWTR NAKSGVLLNG HVLGLASSRQ ESSAARYDNL CREVIKYVEE GAESAHIYNM 660 AMDVLREAAK KVAAAKKYGP GVTQNSLFSG CQQHHSCSVD QDKKIQELTV ELENASQRCE 720 AYRTKLLAVL KDMEEEKTKM LVKVENDGCV NQAESQRNIF GFSSSHN

Sequence ? help Back to Top

Protein Sequence Length: 767 aa Download sequence

MEFEPLDIEN GVIEFDEMRN SNGEDDSERP SDYYDHVLPD NSRNFETLNG DPNLEPFEGM  60
EFDSEQAARI FYNSYARRIG FSTRVSVYQR SRRDGSIICR QIVCSREGFR RGSSENRSKR  120
QRTITRVGCK AQMTVKKQGS GKWAVSKLIK EHNHELVPPD KVHCLRSHRH VSGPARSLID  180
TLQAAGMGPS GVMSVLIKES GGVNNVGFTK VDCQNYMSSS RQRTLGSGGQ VVIDNLKQMQ  240
AEDPSFFCAF QGDFENTTGN IFWADANSRM NYSYFGDTVT FDTTYRMNRY RIPFAPFTGL  300
NHHGQPVLFG CALLLNESEA SFIWLFEAWL AAMSGRSPNS ITTDQDRIIR AAVAQVFPGT  360
RHRFCKWNVF REAQERLSDV YQSHPHFEAE FQRCINMTET VDEFESCWES LIRRYNLVGN  420
EWLQSMYNVR QQWVPVYLRD TFFGEMSMTQ ASDNINSYFD GYINASTNIQ ALIKQYEKAI  480
ASRHEKEVKA DYDTVNTEPV LKTPSPMEKQ VANLYTRKIF MKFQEELVET LAYPATIVND  540
TGSEIIYRVA KFGEEQKAHF VRYNIFEKKA SCSCQLFEFS GIICRHILAV FRVTNILTLP  600
SHYILKRWTR NAKSGVLLNG HVLGLASSRQ ESSAARYDNL CREVIKYVEE GAESAHIYNM  660
AMDVLREAAK KVAAAKKYGP GVTQNSLFSG CQQHHSCSVD QDKKIQELTV ELENASQRCE  720
AYRTKLLAVL KDMEEEKTKM LVKVENDGCV NQAESQRNIF GFSSSHN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein