PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY49666.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

G2-like

Protein Properties

Length: 572aa MW: 63944.3 Da PI: 6.207

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY49666.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.1	4.2e-28	330	384	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH++Fv+aveqL G ++A+P++ilelmkv+gLt+++v+SHLQkYR++ GAY49666.1 330 KMKVDWTPELHKKFVQAVEQL-GVDQAIPSRILELMKVEGLTRHNVASHLQKYRMH 384 5689***************.******************************96 PP
2	Myb_DNA-binding	44.7	3.2e-14	333	382	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e+++++v+av+qlG + +++I + m +g+t+ ++ s++qky+ GAY49666.1 333 VDWTPELHKKFVQAVEQLGVDqaIPSRILELMKvEGLTRHNVASHLQKYR 382 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 572 aa Download sequence
MVCTANDLSA WKDFPKGLRV LLLDQDSSAA AELKFKLEAM DYIVSTFYNE NEALSAFSDK 60 PENFHVAIVE VTTSNTDGSF KFLETAKDLP TIITSNIHCL STMMKCIAIM VMNQLFDNNF 120 QLGAVEFLRK PLSEDKLRNL WQHVVHKAFN AGGSALSDSI KPVKESVVSM LHLKLENGES 180 KNEKSENTEY VLVPQQSDNE QSEPNDKYPA PSTPQLKQGG RLLDDIDCQD NTNFSTEKES 240 AEQDGESKFV ETTCGNSIAE GTLQEDKPQR PRETIVKEEH DPTNGSKTEC NMLPLPYEKD 300 NLKGSNCVIE NPSKASGLQN SCGNKANRKK MKVDWTPELH KKFVQAVEQL GVDQAIPSRI 360 LELMKVEGLT RHNVASHLQK YRMHRRHILP KEDDRKWPHA RDQMLRNYYP HKPIMAFPPY 420 HSNHLVPTGP VYPVWGAPSN HLAAVQMWAP PGYPPWQQAE SWNWKPYPGM PADAWGCPVM 480 PLPNGSYSSF PQGASGYHNS GVDDNSYAMP QNSVDLHPAE EVIDKVVKEA ISKPWLPLPL 540 GLKPPSADSV LAELSRQGIS TIPPRINGSH PC

Sequence ? help Back to Top

Protein Sequence Length: 572 aa Download sequence

MVCTANDLSA WKDFPKGLRV LLLDQDSSAA AELKFKLEAM DYIVSTFYNE NEALSAFSDK  60
PENFHVAIVE VTTSNTDGSF KFLETAKDLP TIITSNIHCL STMMKCIAIM VMNQLFDNNF  120
QLGAVEFLRK PLSEDKLRNL WQHVVHKAFN AGGSALSDSI KPVKESVVSM LHLKLENGES  180
KNEKSENTEY VLVPQQSDNE QSEPNDKYPA PSTPQLKQGG RLLDDIDCQD NTNFSTEKES  240
AEQDGESKFV ETTCGNSIAE GTLQEDKPQR PRETIVKEEH DPTNGSKTEC NMLPLPYEKD  300
NLKGSNCVIE NPSKASGLQN SCGNKANRKK MKVDWTPELH KKFVQAVEQL GVDQAIPSRI  360
LELMKVEGLT RHNVASHLQK YRMHRRHILP KEDDRKWPHA RDQMLRNYYP HKPIMAFPPY  420
HSNHLVPTGP VYPVWGAPSN HLAAVQMWAP PGYPPWQQAE SWNWKPYPGM PADAWGCPVM  480
PLPNGSYSSF PQGASGYHNS GVDDNSYAMP QNSVDLHPAE EVIDKVVKEA ISKPWLPLPL  540
GLKPPSADSV LAELSRQGIS TIPPRINGSH PC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	1e-154	ARR-B family protein