PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY49695.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 322aa    MW: 36074 Da    PI: 9.3904
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY49695.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.19.8e-09262309247
                      SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 
                      g W++ Ed  l++a k ++++   +W++Ia+ ++ gR+   c  r+ ++
       GAY49695.1 262 GVWSAGEDIALLNALKAFPKDvplRWEKIAAAVP-GRSKAACMKRFSDL 309
                      78********************************.**********9776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MEFLDEDARP RFLFQSRPQP SSSSLDGSNH NNNIHQKPTK LSVFITLTIS SFFIFVAFFF  60
FQSSEPFQSL LLWLSLSLFI GPFAPSHLTG GHTRVGHGPI VETPPIPDPN IEKKLQKPQK  120
NRSLANKSPD FIPGSVPIVE NSNGSIGNES KGEKVEVLQR KSEEEKEWNE EDIEILKKQM  180
VKNPVGKPKR WEVIAEAFNG RHRVESVIKK AKELGEKKID DSDSYNQFLK NRKAIDMRVV  240
QENCEDSKKE SQENVVVGGG GGVWSAGEDI ALLNALKAFP KDVPLRWEKI AAAVPGRSKA  300
ACMKRFSDLK RDFRSSKAGD EA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45420.12e-68MYB_related family protein