PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY49782.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TALE

Protein Properties

Length: 641aa MW: 70359.2 Da PI: 6.8836

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY49782.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.8	1e-09	438	475	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LAk++gL+ +qV++WF N R + GAY49782.1 438 FEHflHPYPTDTEKLMLAKQTGLSRSQVSNWFINARVR 475 554459******************************88 PP
2	BELL	104.8	5.9e-34	303	372	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 ++++kk++L+s+l+eV++rYkqy++q+q+ ++sFe vaglg+a+p+++lAlka+S+hFr+Lk+ai++q+ GAY49782.1 303 SDNRRKKSRLISMLDEVYRRYKQYYQQMQAAVASFEYVAGLGNAAPFANLALKAMSKHFRSLKNAITDQL 372 5799***************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 641 aa Download sequence
MAEGFEPYHV PQQSRRDKLR IVAQNHPSVV CVESSSSAPA PAAGLLPLYD ASSLLSSSDL 60 LTAHEFQHQQ QQDNKATNPV CVVKEEGVNL MGFVGGASTS SHHNHHPYLD PHSTLHNLNP 120 SSILDINNNN NPFLFTAPHN LQNQLRDFDQ SYNGGEGSSE VVLFKPEPLA LSLSSHHTTQ 180 NNSLPLELNL QRYGSAIYGD HRVTSTGYVV PSSSTVAAGA SGSTSNEVSR STSSLPFGPF 240 TGYASILKGS RFLKPAQQLL EEFCDVGQGV FTEKNYTVDS SLMDPPLVNL NASGIVVDDG 300 DGSDNRRKKS RLISMLDEVY RRYKQYYQQM QAAVASFEYV AGLGNAAPFA NLALKAMSKH 360 FRSLKNAITD QLQFTNKAQI QANRGKDEAS TFGSTDRGPY GHRPVLNSGF IERQSQPVWR 420 PQRGLPERAV TVLRAWLFEH FLHPYPTDTE KLMLAKQTGL SRSQVSNWFI NARVRLWKPM 480 VEEIHMLETR QGQKATQREE QSANRSSDHL PSSNSLPSEN PSTSTQRVQE TPSKRSRDEF 540 PDIPVGNEEP PNLSYNSLSN HPHVGVGVSM AGGNSGVSLT LGLYQNNGIG LSEPYPISAA 600 QRFGLVHETS SEGFVLSGYE AQSRIFGRDV IGGQLLHDFV G

Sequence ? help Back to Top

Protein Sequence Length: 641 aa Download sequence

MAEGFEPYHV PQQSRRDKLR IVAQNHPSVV CVESSSSAPA PAAGLLPLYD ASSLLSSSDL  60
LTAHEFQHQQ QQDNKATNPV CVVKEEGVNL MGFVGGASTS SHHNHHPYLD PHSTLHNLNP  120
SSILDINNNN NPFLFTAPHN LQNQLRDFDQ SYNGGEGSSE VVLFKPEPLA LSLSSHHTTQ  180
NNSLPLELNL QRYGSAIYGD HRVTSTGYVV PSSSTVAAGA SGSTSNEVSR STSSLPFGPF  240
TGYASILKGS RFLKPAQQLL EEFCDVGQGV FTEKNYTVDS SLMDPPLVNL NASGIVVDDG  300
DGSDNRRKKS RLISMLDEVY RRYKQYYQQM QAAVASFEYV AGLGNAAPFA NLALKAMSKH  360
FRSLKNAITD QLQFTNKAQI QANRGKDEAS TFGSTDRGPY GHRPVLNSGF IERQSQPVWR  420
PQRGLPERAV TVLRAWLFEH FLHPYPTDTE KLMLAKQTGL SRSQVSNWFI NARVRLWKPM  480
VEEIHMLETR QGQKATQREE QSANRSSDHL PSSNSLPSEN PSTSTQRVQE TPSKRSRDEF  540
PDIPVGNEEP PNLSYNSLSN HPHVGVGVSM AGGNSGVSLT LGLYQNNGIG LSEPYPISAA  600
QRFGLVHETS SEGFVLSGYE AQSRIFGRDV IGGQLLHDFV G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	1e-109	TALE family protein