PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY49952.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GATA
Protein Properties Length: 193aa    MW: 20905 Da    PI: 9.5529
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY49952.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.64.1e-19136172135
        GATA   1 Cs..nCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C+  nC+t +Tp+WRrgp g+ktLCnaCG++yrk+++
  GAY49952.1 136 CTnyNCNTNDTPMWRRGPLGPKTLCNACGIKYRKEEE 172
                 55559*****************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MVNEGMNSNA NVGQRFNPNE IAWPQPNLSS QHSQAQYMYP NNGYGFSTFP AGSSSMGSQL  60
PNSPLNYNNV SINPDNNLQH AAAASALASM KGYTLINVPA SRNQQLGTTA SSSAAASAPR  120
GAAGIPRPHG YPYKRCTNYN CNTNDTPMWR RGPLGPKTLC NACGIKYRKE EEKRKAKETE  180
TSNIDQNSNN QTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20750.13e-14GATA family protein