PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY49953.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GATA
Protein Properties Length: 259aa    MW: 28697.6 Da    PI: 6.7054
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY49953.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.96.8e-19205241135
        GATA   1 Cs..nCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C+  nC+t++Tp+WRrgp g+ktLCnaCG++yrk+++
  GAY49953.1 205 CTnyNCKTSDTPMWRRGPLGPKTLCNACGIKYRKEEE 241
                 55559*****************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MDSQWFNQAE ATNMNGCDLQ NAGNRIDLTL KLGLPDSSDH ENQHLRHFDQ MTPCHSNLNI  60
DALNSHEGMN MANNNIGQGF NPGEVAWQPS NFTEQYVHSD NNNNNHYGLI PFQGSTSMGS  120
PPLPIYYPHN INSVNNFNIN PNQNVPLAAA APPPPPMNDC TLLDVPPRRD ELEEGSSSAA  180
APARRRATGT RRPRGGSIID PNKRCTNYNC KTSDTPMWRR GPLGPKTLCN ACGIKYRKEE  240
EKRLKAKEAN SQSSNTETD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20750.12e-14GATA family protein