PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY50060.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 288aa    MW: 32062.1 Da    PI: 4.2094
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY50060.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.75.3e-172577156
         AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                s+y+GV +++ +grW+A+I   +   g +k+ +lg++ t eeAa+a++ a+ +++g+
  GAY50060.1 25 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYNTQEEAAAAYDMAAIEYRGA 77
                89****99**********99966...3.6*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MQKASKEEYL ASLRRRSSGF SRGVSKYRGV ARHHHNGRWE ARIGRVFGNK YLYLGTYNTQ  60
EEAAAAYDMA AIEYRGANAV TNFDISHYID QLKKKGIFPL PNSSMESEET EAEVEVEQPQ  120
PEQQQQQQTQ PALLPQQEEI VSPHQQVLQQ NTQLPSCMMD ASCAMAATDE HELTWSFCLD  180
TAVGLTPLTF PDIPMGNAGE LPDLFDNTGL FEDNIDFIFD VEAEEVSKYI NENNPEGNDN  240
YTGNMEEEEE ENGNKLVVSR LLSASSTSSN ASSPSSSTTT SVSCNYSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.21e-44ERF family protein