PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY50164.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C3H
Protein Properties Length: 102aa    MW: 11186.6 Da    PI: 7.1292
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY50164.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH38.51.9e-125076127
                --S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHgp 27
                ++++ C+++ rtG C++G++C+F+H+p
  GAY50164.1 50 PGEPDCSYYIRTGLCRFGATCRFNHPP 76
                5799*********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    
MQFEAGISLS RGAAVTEGPS LSPSLNQDAL WQMNLRTNEA MESGSLPERP GEPDCSYYIR  60
TGLCRFGATC RFNHPPNRKL AIATARIKGD YPERVGQPEC QA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02830.17e-47C3H family protein