PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY50191.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GRAS
Protein Properties Length: 459aa    MW: 51491 Da    PI: 6.1502
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY50191.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS310.14.9e-95534552373
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl.....fsevsPilkfsh 95 
                 ++lL++cA+a++s+d++laq++L+ l+++a pdgd++qRl+  f++AL +r a+  s+++k l++ ++++ n + + + +++     f++++P+++f++
  GAY50191.1  53 EQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTCAFLRALITRAAK--SGTCKMLAAMANAHCNLVVHNHKFSVielasFVDLTPWHRFGF 149
                 79****************************************************..8888888888887777444444443334488************ PP

        GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl.......vak 184
                  +aN aIleav+g++ vHi+Df++++++Q p+L++a+a+R egpp+l++T+ g+ e +      ++ee+g +L +fA++ +v +ef+v+        a+
  GAY50191.1 150 TAANAAILEAVDGCSVVHIVDFSLTHCMQIPTLIDAIANRFEGPPRLKLTVAGATEDVppmLDLSYEELGTKLVNFARSRNVMLEFRVIpssyadgFAS 248
                 ******************************************************887798888999***********************9997766666 PP

        GRAS 185 rledleleeLrvkp.gEalaVnlvlqlhrll....................desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerfleale 262
                  +e++++++L   + gEal++n++++lh+++                     +s+s++  r+ +Lk+++sl+P++vv+v+++ad+++++++ r+ +a++
  GAY50191.1 249 LIEQMRVQQLVYAEsGEALVINCHMMLHYIPeetlnpsttfsslnpysleyYSSTSIS-LRSMFLKAIRSLEPTIVVLVDEDADLTANNLVCRLRSAFN 346
                 777778888877779**********************************964444444.488************************************* PP

        GRAS 263 yysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlg 361
                 y +  +d +++ lpr s++r ++E++ + ++++nv+a+eg +r+er e +++W +r+++a F+ ++++e+a+++ k++l +++  g+ +++e++ lvl+
  GAY50191.1 347 YLWIPYDLVDTFLPRGSKQREWYEAA-VCWKVENVIAHEGLQRVERLEPKSRWVQRMRNANFRGITFGEEAVSELKTMLDEHA-AGWGLKKEEDDLVLT 443
                 **************************.99******************************************************.8999*********** PP

        GRAS 362 WkdrpLvsvSaW 373
                 Wk+++ v++SaW
  GAY50191.1 444 WKGHNAVFASAW 455
                 ************ PP
Sequence ? help Back to Top
Protein Sequence    Length: 459 aa     Download sequence    
MMQFTETPPP PLHQISSFSN FTMNKNQIHR TRPWPGFPSS KSFASFGDAN CMEQLLVHCA  60
NAIESNDATL AQQILWVLNN IAPPDGDSNQ RLTCAFLRAL ITRAAKSGTC KMLAAMANAH  120
CNLVVHNHKF SVIELASFVD LTPWHRFGFT AANAAILEAV DGCSVVHIVD FSLTHCMQIP  180
TLIDAIANRF EGPPRLKLTV AGATEDVPPM LDLSYEELGT KLVNFARSRN VMLEFRVIPS  240
SYADGFASLI EQMRVQQLVY AESGEALVIN CHMMLHYIPE ETLNPSTTFS SLNPYSLEYY  300
SSTSISLRSM FLKAIRSLEP TIVVLVDEDA DLTANNLVCR LRSAFNYLWI PYDLVDTFLP  360
RGSKQREWYE AAVCWKVENV IAHEGLQRVE RLEPKSRWVQ RMRNANFRGI TFGEEAVSEL  420
KTMLDEHAAG WGLKKEEDDL VLTWKGHNAV FASAWVPAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.10.0GRAS family protein