PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY50300.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 155aa    MW: 17119.3 Da    PI: 9.7914
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY50300.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.31.6e-172170255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ykG+r +k +g+WvAeIr+p   +kr r++lg++ t+  Aa+a++ a  +l+g
  GAY50300.1 21 PYKGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSTPVAAARAYDTAVFYLRG 70
                59*****99.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MQGGPAVAET TAARKRSMDR PYKGIRMRKW GKWVAEIREP NKRSRIWLGS YSTPVAAARA  60
YDTAVFYLRG PSARLNFPDL LRGEGAVGAA DMSAAFIRKK ATEVGARVDA IESALHNTPD  120
QEIPPPHNDS GFLNRVDLNK LPDPEDLDGA DWQTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50260.11e-59ERF family protein