PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY50333.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 260aa    MW: 28237.1 Da    PI: 9.7258
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY50333.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.85.8e-145397147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT eE++++++a +++  + Wk+I   +g  +t  q++s+ qky
       GAY50333.1 53 RESWTDEEHDKFLEALQLFDRD-WKKIEDFVG-SKTVIQIRSHAQKY 97
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MNSNTSSSTH HTPPQPMATT SSAATTSSSA IDGGAGAAGS KKVRKPYTIT KSRESWTDEE  60
HDKFLEALQL FDRDWKKIED FVGSKTVIQI RSHAQKYFLK VQKNGTIAHV PPPRPKRKAA  120
HPYPQKASKN VLLPLQASMA YPSVNALAHG FAAWDDASML GISGIGNSTV GGIGSSARTE  180
PSTDMPKQGK QVPVLHGIPD FAEVYSFIGS VFDPDTKGHV QKLKEMDPIN FETVLLLMRN  240
LSLNLSSPDF EPIVSHKILC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.13e-92MYB_related family protein