PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY50863.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 490aa MW: 54671.6 Da PI: 6.4533

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY50863.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	53.1	1e-16	64	138	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY+eYA++vGFs ++ + ++ + ++ i+ r+fvC +eg ++++ ++ C+a+l+++++ ++kw+vtk+++eH+H+++ GAY50863.1 64 FYDEYARRVGFSSKVCHFSRPRPDEPIVFREFVCGREGLKRRHGES--------------CDAMLRIELKGQNKWVVTKFVKEHSHPMV 138 9************************************9998877..............************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MDVDVVEVEG GMGQRGVSDD GEIEPNESAE ANNAENSSAH GDDDGIMDPY VGMEFHTEDA 60 AKTFYDEYAR RVGFSSKVCH FSRPRPDEPI VFREFVCGRE GLKRRHGESC DAMLRIELKG 120 QNKWVVTKFV KEHSHPMVSP SKVHYLRPRR HFAGTTKAEV YQGVGIVPSG IMYVSMDGNR 180 ATVETNNRGA RTATPVETRT APPIESRTAP PVESRTAPPI ESRTAPPIEQ YERALENSFE 240 REIEADFDTI CTTPRLRTPS PMERQAANSF TRKVFTKFQE EEGWKKVAVV KKNVAKVPPP 300 GSHVSGTGYD DRKISASPSD STPLLWPRQD EMTRRFNLND SGPAIQPVSD LNLPRMAPVS 360 LHRDDGPSDN MVVLPCLKSM TWVMENKNSA PGNRVAVINL KLHDYSKTPS AELEVKFQLS 420 KVTLEPMLRS MAYISDQLST PANRVAVINL KLQDTETISG ESEVKFQVSR DTLGAMLRSM 480 AYIREQLSNT

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MDVDVVEVEG GMGQRGVSDD GEIEPNESAE ANNAENSSAH GDDDGIMDPY VGMEFHTEDA  60
AKTFYDEYAR RVGFSSKVCH FSRPRPDEPI VFREFVCGRE GLKRRHGESC DAMLRIELKG  120
QNKWVVTKFV KEHSHPMVSP SKVHYLRPRR HFAGTTKAEV YQGVGIVPSG IMYVSMDGNR  180
ATVETNNRGA RTATPVETRT APPIESRTAP PVESRTAPPI ESRTAPPIEQ YERALENSFE  240
REIEADFDTI CTTPRLRTPS PMERQAANSF TRKVFTKFQE EEGWKKVAVV KKNVAKVPPP  300
GSHVSGTGYD DRKISASPSD STPLLWPRQD EMTRRFNLND SGPAIQPVSD LNLPRMAPVS  360
LHRDDGPSDN MVVLPCLKSM TWVMENKNSA PGNRVAVINL KLHDYSKTPS AELEVKFQLS  420
KVTLEPMLRS MAYISDQLST PANRVAVINL KLQDTETISG ESEVKFQVSR DTLGAMLRSM  480
AYIREQLSNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	2e-93	FAR1 family protein