PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY50897.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 164aa    MW: 18435.2 Da    PI: 8.5085
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY50897.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.31.2e-121462255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                r+  n+ E+ RR ++++ +++L +++P +      Kls  +iL +++ YI +Lq
  GAY50897.1 14 RAQRNIQEKHRRTHMKDLISQLASVIPCN-----SKLSMPQILDETTSYIMHLQ 62
                8889************************8.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MVAKKCSAAG SSSRAQRNIQ EKHRRTHMKD LISQLASVIP CNSKLSMPQI LDETTSYIMH  60
LQKNKESLER KKALLKGDDH PEPTVMNIST SGSTLEVNLI CGLNRNFMFH EIISVLEEEG  120
AEVIDVTRFN SGDRVIFSVL SKAINSRIGV ETERVQERLK DLIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10585.16e-34bHLH family protein