PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY50900.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 312aa    MW: 35048.9 Da    PI: 7.3642
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY50900.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.36.5e-091457255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                r+  n+ E+ RR ++++ +++L +l+P++          + iL +A+ YI +Lq
  GAY50900.1 14 RAQRNIKEQHRRMHMKDLISQLASLIPSN----------SKILDEATSYITHLQ 57
                8889************************9..........79************9 PP
2HLH38.42.2e-12162210255
                 HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 r+  n+ E+ RR ++++ +++L +++P +      Kls  +iL +A+ YI +Lq
  GAY50900.1 162 RAQRNIKEKHRRMHMKDLISQLASVIPCN-----SKLSMPQILDEATSYIMHLQ 210
                 8889************************8.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MAEENSSAAG SSSRAQRNIK EQHRRMHMKD LISQLASLIP SNSKILDEAT SYITHLQKNK  60
ESLERRRALL KEEDHSEPTV MNITTSGSTL EVNLICGSNR NFMFHEIISV LEEGAAEIIN  120
VTQFNSGDRV IFSVLSKVAH LYYLNPKNMV GENCSAAGSS SRAQRNIKEK HRRMHMKDLI  180
SQLASVIPCN SKLSMPQILD EATSYIMHLQ KNKESLERKK ALLKGDDHPE PTVMNISTSG  240
STLEVNLICG LNRNFMFHEI ISVLEEEGAE VINVTQFNSG DRVIFSVQSK AINSRIGVET  300
ERVQERLKDL IL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10585.12e-33bHLH family protein