PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY50993.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Protein Properties

Length: 714aa MW: 79040.6 Da PI: 6.9365

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY50993.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	53.9	3.2e-17	32	122	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ffk+++ +d s +l lp kfae + + +k+ ++ed+sg Wev + ++ +g+ +++GW+ F ++L+ gDf+vF +++ s+f vvk+f+k GAY50993.1 32 FFKIMIGKDC--SEILFLPPKFAEMVSAV--IGKKAVIEDSSGDCWEVSV--SNVDGSPAFRQGWNAFSAYHRLEIGDFLVFDYIRGSRF--VVKIFDK 122 7788855444..4579*****999866..7889***********..99999************************98999..***98 PP
2	B3	38.3	2.3e-12	645	705	28	90
--..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 28 gkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 + ++ k ++l+d++ r W v + +sg vlt+GW F kan+++ gD ++F +++ se GAY50993.1 645 RSRTQRKVVVLRDPDMRMWPVLY--HERSGFKVLTSGWDAFSKANNIQPGDGCIFGVESYSES 705 44567789*************..****************************97655555 PP

Sequence ? help Back to Top
Protein Sequence Length: 714 aa Download sequence
MGGKVEACAE CTKKCLLVHR NKEKLSPVIH SFFKIMIGKD CSEILFLPPK FAEMVSAVIG 60 KKAVIEDSSG DCWEVSVSNV DGSPAFRQGW NAFSAYHRLE IGDFLVFDYI RGSRFVVKIF 120 DKTGCEKQKI SLTTNKRKRY RTRTNFTDRE GQCYTADTGS MSKERKNART TTNSTDRDGQ 180 CHTADKDSMS KERSRPSIFS VSDEEMSESQ CELNDVEKAS TSNGKISGKR PLSVSRANFL 240 EDPYYLIDRD LGDQQREDRC SVFDLSHFEM VGNNCGTAIR DKMKDGDDYS HHADASLISE 300 FEDVLVNKYP VDEEIPNRVA ASDASDMDIM KNNGVEKTEQ IISRVELQKD GGNNSNVSSG 360 VSQKCHGAEE ESKALSKSKR KTDRATVSPM ECNQSEHLKF IGTFGESSVQ VTTGMQNCRF 420 VEPQTDGWTS SSSSRGVPKK CHGGVEELKA VSKSLTEIDW AMVSPVEYNR SAQLKLVGQY 480 GESRVQVTSG MQNCQFVEPQ KNEGNNSNSS SGVSKKCIGA EEESNALTKL LTKVHQGMVS 540 QTGCTSLGDS NQSAQLNFVG EFGGSSVLVT HGMQKGQFGN LPQLIKVERG LRYDMIGREY 600 GISQVVKTET LDLVPTSYIP CATPSDGQPF LELSTCLPTS SFRGRSRTQR KVVVLRDPDM 660 RMWPVLYHER SGFKVLTSGW DAFSKANNIQ PGDGCIFGVE SYSESIYGVS IVRK

Sequence ? help Back to Top

Protein Sequence Length: 714 aa Download sequence

MGGKVEACAE CTKKCLLVHR NKEKLSPVIH SFFKIMIGKD CSEILFLPPK FAEMVSAVIG  60
KKAVIEDSSG DCWEVSVSNV DGSPAFRQGW NAFSAYHRLE IGDFLVFDYI RGSRFVVKIF  120
DKTGCEKQKI SLTTNKRKRY RTRTNFTDRE GQCYTADTGS MSKERKNART TTNSTDRDGQ  180
CHTADKDSMS KERSRPSIFS VSDEEMSESQ CELNDVEKAS TSNGKISGKR PLSVSRANFL  240
EDPYYLIDRD LGDQQREDRC SVFDLSHFEM VGNNCGTAIR DKMKDGDDYS HHADASLISE  300
FEDVLVNKYP VDEEIPNRVA ASDASDMDIM KNNGVEKTEQ IISRVELQKD GGNNSNVSSG  360
VSQKCHGAEE ESKALSKSKR KTDRATVSPM ECNQSEHLKF IGTFGESSVQ VTTGMQNCRF  420
VEPQTDGWTS SSSSRGVPKK CHGGVEELKA VSKSLTEIDW AMVSPVEYNR SAQLKLVGQY  480
GESRVQVTSG MQNCQFVEPQ KNEGNNSNSS SGVSKKCIGA EEESNALTKL LTKVHQGMVS  540
QTGCTSLGDS NQSAQLNFVG EFGGSSVLVT HGMQKGQFGN LPQLIKVERG LRYDMIGREY  600
GISQVVKTET LDLVPTSYIP CATPSDGQPF LELSTCLPTS SFRGRSRTQR KVVVLRDPDM  660
RMWPVLYHER SGFKVLTSGW DAFSKANNIQ PGDGCIFGVE SYSESIYGVS IVRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66980.1	6e-14	B3 family protein