PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY50994.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family B3
Protein Properties Length: 682aa    MW: 75715.9 Da    PI: 6.6361
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY50994.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3543e-1732122199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 ffk+++ +d   s +l lp kfae  + +   +k+ ++ed+sg  Wev +  ++ +g+  +++GW+ F   ++L+ gDf+vF +++ s+f  vvk+f+k
  GAY50994.1  32 FFKIMIGKDC--SEILFLPPKFAEMVSAV--IGKKAVIEDSSGDCWEVSV--SNVDGSPAFRQGWNAFSAYHRLEIGDFLVFDYIRGSRF--VVKIFDK 122
                 7788855444..4579*******999866..7889***************..99999****************************98999..*****98 PP
2B338.42.2e-126136732890
                 --..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
          B3  28 gkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                  + ++ k ++l+d++ r W v +    +sg  vlt+GW  F kan+++ gD ++F +++ se 
  GAY50994.1 613 RSRTQRKVVVLRDPDMRMWPVLY--HERSGFKVLTSGWDAFSKANNIQPGDGCIFGVESYSES 673
                 44567789***************..******************************97655555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 682 aa     Download sequence    
MGGKVEACAE CTKKCLLVHR NKEKLSPVIH SFFKIMIGKD CSEILFLPPK FAEMVSAVIG  60
KKAVIEDSSG DCWEVSVSNV DGSPAFRQGW NAFSAYHRLE IGDFLVFDYI RGSRFVVKIF  120
DKTGCEKQKI SLTTNKRKRY RTRTNFTDRE GQCYTADTGS MSKERKNART TTNSTDRDGQ  180
CHTADKDSMS KERSRPSIFS VSDEEMSESQ CELNDVEKAS TSNGKISGKR PLSVSRANFL  240
EDPYYLIDRD LGDQQREDRC SVFDLSHFEM VGNNCGTAIR DKMKDGDDYS HHADASLISE  300
FEDVLVNKYP VDEEIPNRVA ASDASDMDIM KNNGVEKTEQ IISRVELQKD GGNNSNVSSG  360
VSQKCHGAEE ESKALSKSKR KTDRATVSPM ECNQSEHLKF IGTFGESSVQ VTTGMQNCRF  420
ESLTEIDWAM VSPVEYNRSA QLKLVGQYGE SRVQVTSGMQ NCQFVEPQKN EGNNSNSSSG  480
VSKKCIGAEE ESNALTKLLT KVHQGMVSQT GCTSLGDSNQ SAQLNFVGEF GGSSVLVTHG  540
MQKGQFGNLP QLIKVERGLR YDMIGREYGI SQVVKTETLD LVPTSYIPCA TPSDGQPFLE  600
LSTCLPTSSF RGRSRTQRKV VVLRDPDMRM WPVLYHERSG FKVLTSGWDA FSKANNIQPG  660
DGCIFGVESY SESIYGVSIV RK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.16e-14B3 family protein