PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY51103.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 243aa    MW: 26852.6 Da    PI: 4.5489
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY51103.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.12.2e-1863113155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+GVr ++ +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  GAY51103.1  63 PVYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFRTPEMAARAHDVAALSIKG 113
                 68*****998.**********843...6**********************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MASSSELSNI SSEEAESTST NSSTNDSLSQ QRSRSDTGCR SENHPGSSRP KRKRESESGT  60
KHPVYRGVRM RSWGKWVSEI REPRKKSRIW LGTFRTPEMA ARAHDVAALS IKGDSAVLNF  120
PELVEVLPRP VSLLPRDIQT AATKAASMII DPSSSTCDEV SAQPQQDEQA ELGEIVQLPN  180
IEGSFDFDSA ESHNELNIPI HDDLFDGWIY PPVVQDFVAE FPEHILAAES LIPGDFEASS  240
VWD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-57ERF family protein