PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY51360.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 91aa    MW: 11108.7 Da    PI: 10.0957
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY51360.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.43.4e-083170445
                     S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     ++++E++l+++  k+ G + W++Ia +++ gR ++++  +w 
       GAY51360.1 31 MSEQEEDLIYRMYKLVGDR-WALIAGRIP-GRKAEEIERFWI 70
                     79***************99.*********.*********995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    
MDKRRRKQAK TTTTTFYSEE VSSIEWEFIN MSEQEEDLIY RMYKLVGDRW ALIAGRIPGR  60
KAEEIERFWI MRHGQAFADR RRELRIYNSK S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
128DKRRRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53200.15e-39MYB_related family protein