PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY51589.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 244aa    MW: 27097.7 Da    PI: 9.7169
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY51589.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.81.7e-2056105255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae Aa a+++a+++++g
  GAY51589.1  56 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEAAALAYDEAALRFKG 105
                 7********.**********94....45***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MSAMVSALSQ VIGNTQNSPT SLQLSQNPNF TTSSSNTSEQ DLSQRVKDQG NVRRRHYRGV  60
RQRPWGKWAA EIRDPKKAAR VWLGTFDTAE AAALAYDEAA LRFKGSKAKL NFPERVQANL  120
TTHRYQDHYY HAAAATTSQQ VSNPPPPPPP RPLPLTQEVM YSNLFQYQQA NYGIPSGFYG  180
EYRYLPVTLP TTSSSSSSSS ATSSQQPQQH ELLRYGMQLE SSSSSASDPH ESTRRNSDTS  240
HPGD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.12e-27ERF family protein