PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY51645.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family FAR1
Protein Properties Length: 207aa    MW: 23464.8 Da    PI: 7.9269
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY51645.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR190.81.9e-2843132190
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 kfY  YA+++GF vr+ + ++s+++g++  r++ C+k+g++ ++k ++  e+++r++ r gCka++ vk+ek+gkw+vt++ ++HnH+l+
  GAY51645.1  43 KFYMGYARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNHPLV 132
                 6**********************************************9****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MELDEGAAAA DSCVIEKSGE LAGDEILEPY VGMEFDSEDA ARKFYMGYAR RMGFVVRIMQ  60
RRRSRTDGTT LARRLGCNKQ GFSPNSKGTN GPEKKPRPSA REGCKATILV KMEKSGKWVV  120
TRFIKDHNHP LVVTANGYST VGDKDKKIEE LTLELERQEQ LCAAYREKLF NFMNNVEEQT  180
EELSSKIQVI VDNIRKVESE MLKSFLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12850.16e-66FAR1 family protein