PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY51649.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family FAR1
Protein Properties Length: 258aa    MW: 30318.9 Da    PI: 5.1894
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY51649.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR184.61.6e-2678168190
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 +fY +Y++++GF+vr++++++s+ n+ ++ ++fvCskeg+re++   ++++    + + tr gC a+l++ +++ +kw+vtk+ +eHnHel+
  GAY51649.1  78 EFYVAYGRRTGFTVRIHHNRRSRINNVVIGQDFVCSKEGFREKKYMYRKDR-VlpPPPITREGCPAMLRLALRDGDKWVVTKFIKEHNHELM 168
                 6******************************************99983333.244899********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MESTSNQVID SDESERYLQV AGYDENDLAD DDLSKNIELY TGEVDKILEQ SFESLPSVGD  60
AEEPYIGLEF KSRDDAREFY VAYGRRTGFT VRIHHNRRSR INNVVIGQDF VCSKEGFREK  120
KYMYRKDRVL PPPPITREGC PAMLRLALRD GDKWVVTKFI KEHNHELMSP SKVPWRGSTK  180
NFISEDEKDR RIRELTIELN NERQRFKRRC AAYQEQLNMV FKFVEEHTDH LSGRVKDIVD  240
NIRELEDEQP ENSDCKCV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.14e-37FAR1 family protein