PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY51850.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family B3
Protein Properties Length: 724aa    MW: 83061.1 Da    PI: 8.9892
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY51850.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.52.1e-1234120698
                 ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 + ++ l+ + l++p kf++++g +   s   +++ + gr W v+l  +k+ ++ ++  GW eF +   + +g f++Fk++g+s+f  +v +f+
  GAY51850.1  34 IVPSILQDKKLRIPDKFVQKFGDE--LSSIAKFTIPGGRMWFVEL--KKCNKQLWFDIGWHEFIEHCSIHSGYFLIFKYQGNSNF--NVYIFD 120
                 4455566677********999855..7779***************..9***9*****************************9999..998886 PP
2B360.72.4e-19254347198
                 EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 f  +l ps+v ++ +l +p +fa+++ +g+k     +t+ d++g++W v++i+++++ +  ++kGW eFv +n+L+e D++vF+l+++++ +l+ ++fr
  GAY51850.1 254 FRVILRPSYVYRTLLLHVPTSFARKYlNGIKG---YITIIDSNGKQWPVRCIFKNGGAK--FSKGWPEFVWENNLDESDVCVFELIKSNDVTLKATIFR 347
                 667899********************866643...59999***********99888866..89***********************9999999999998 PP
3B3612.1e-19398488198
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 ffkv +ps v +++ l++p+kf++++g +   s   tl+ ++gr+W+v l  rk +++++l++GW +F++ + + +g f+vFk+ ++s+f   v vf+
  GAY51850.1 398 FFKVILPSTVQEKK-LRIPRKFVKRFGDE--LSAVATLNVPNGRVWQVGL--RKDGRKIWLQDGWDNFAEYHSIAVGYFLVFKYAKNSTF--DVLVFD 488
                 99**********98.********999865..8999***************..********************************999998..777765 PP
4B345.61.3e-146377161296
                 HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                 + + +++p kf ++h +   +++ ++l+d++g++W  +l++  ++++  +++GW  F k ++Lk+g ++vF+l++ ++  l+v++
  GAY51850.1 637 RYSYMYVPSKFSKKHLIR--GTRSIKLQDSDGKEWPAQLTW-SSGCG--IKGGWPAFSKYKNLKQGHVCVFELIKAKDILLKVSI 716
                 55679**********555..4457***************64.44444..9***********************998877677766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 724 aa     Download sequence    
MSEQQTTVDE AMSRPLAPYL QEEGKRSCIF YKLIVPSILQ DKKLRIPDKF VQKFGDELSS  60
IAKFTIPGGR MWFVELKKCN KQLWFDIGWH EFIEHCSIHS GYFLIFKYQG NSNFNVYIFD  120
LAISEIEYPS LEEPSDSKQC HVPIEKDKEK NSSLRILPSL CASCPDPFSP ATKVLDEGVC  180
YKCNKDSTSG VKIEYLHIPK DEHNQETAFH CPQDKGIQFK NTSDEVGLWR AVTTEEKKRT  240
VHAAEMYKSN NPLFRVILRP SYVYRTLLLH VPTSFARKYL NGIKGYITII DSNGKQWPVR  300
CIFKNGGAKF SKGWPEFVWE NNLDESDVCV FELIKSNDVT LKATIFRVLE DARPVWKLKG  360
ASTIKQKFLI QKGLYTTVAN NNVKQMAGGN RRAETSHFFK VILPSTVQEK KLRIPRKFVK  420
RFGDELSAVA TLNVPNGRVW QVGLRKDGRK IWLQDGWDNF AEYHSIAVGY FLVFKYAKNS  480
TFDVLVFDMT ACEIDYPYDY EETESEEGDE METENSVEIL SFTKMNTPPV QQNQVKPGSK  540
PEKKKIGGIK LETATNSREK KRCPTHGNEH GKLKKAAYHE VETDSSDGDQ VFEEMGIFMS  600
EGHRYLSVEE RQSLVTAVRL FKPQNPSFVD ILRSKKRYSY MYVPSKFSKK HLIRGTRSIK  660
LQDSDGKEWP AQLTWSSGCG IKGGWPAFSK YKNLKQGHVC VFELIKAKDI LLKVSIHASS  720
DFLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.14e-80B3 family protein