PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY51852.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family B3
Protein Properties Length: 270aa    MW: 31193.1 Da    PI: 7.9028
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY51852.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.48.3e-1612103199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 ffk+ +++    ++ l++p +f++++g +       tl+ ++g +W+v l  ++ ++++++ +GW +Fvk + +    f+vF++ ++s+f   v +f+k
  GAY51852.1  12 FFKIILQETLQDKK-LRIPEDFVKKFGDE--LCDVATLRVPNGCVWKVGL--TREGRKIWFNDGWHDFVKNHSILKDYFLVFEYAKNSTF--DVLIFDK 103
                 67777666666555.********999755..55699**************..********************************999999..9999998 PP
2B351.22.3e-161902601489
                 T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
          B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                 + +++p kfa+++ +k ++   ++++d +gr+W v+l     sg++ ++kGW  F k+++Lk+gD+++F+l+++++
  GAY51852.1 190 NYVYVPPKFANKYLNKVNG--SIKIKDADGRVWPVNL---AWSGWCGIRKGWPAFSKDKDLKAGDICLFELIRTEG 260
                 56899********544445..59999***********...44567789***********************98654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MAESITAEPF RFFKIILQET LQDKKLRIPE DFVKKFGDEL CDVATLRVPN GCVWKVGLTR  60
EGRKIWFNDG WHDFVKNHSI LKDYFLVFEY AKNSTFDVLI FDKSACEIEY TCAELENEKQ  120
NDGKKSKLRE VAYEDEYKFL AVLEEMGICI SGAYKFLSVE ERQRIICASR LFRLENPSFL  180
CIMGSTTVLN YVYVPPKFAN KYLNKVNGSI KIKDADGRVW PVNLAWSGWC GIRKGWPAFS  240
KDKDLKAGDI CLFELIRTEG VLFKYSVSIA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.18e-32B3 family protein