PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY51853.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family B3
Protein Properties Length: 252aa    MW: 29056.6 Da    PI: 7.8768
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY51853.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B343.65.1e-143791799
                E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                ++p +f++++g +       tl+ ++g +W+v l  ++ ++++++ +GW +Fvk + +    f+vF++ ++s+f   v +f+k
  GAY51853.1  3 RIPEDFVKKFGDE--LCDVATLRVPNGCVWKVGL--TREGRKIWFNDGWHDFVKNHSILKDYFLVFEYAKNSTF--DVLIFDK 79
                69*****999755..55699**************..********************************999999..9999998 PP
2B352.77.9e-171662421495
                 T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
          B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                 + +++p kfa+++ +k ++   ++++d +gr+W v+l     sg++ ++kGW  F k+++Lk+gD+++F+l+++++  ++v+
  GAY51853.1 166 NYVYVPPKFANKYLNKVNG--SIKIKDADGRVWPVNL---AWSGWCGIRKGWPAFSKDKDLKAGDICLFELIRTEGVLFKVS 242
                 56899********544445..59999***********...44567789************************9877755555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MQRIPEDFVK KFGDELCDVA TLRVPNGCVW KVGLTREGRK IWFNDGWHDF VKNHSILKDY  60
FLVFEYAKNS TFDVLIFDKS ACEIEYTCAE LENEKQNDGK KSKLREVAYE DEYKFLAVLE  120
EMGICISGAY KFLSVEERQR IICASRLFRL ENPSFLCIMG STTVLNYVYV PPKFANKYLN  180
KVNGSIKIKD ADGRVWPVNL AWSGWCGIRK GWPAFSKDKD LKAGDICLFE LIRTEGVLFK  240
VSVLCHKHAS LE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.18e-26B3 family protein