PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY51854.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family B3
Protein Properties Length: 298aa    MW: 34107.2 Da    PI: 9.0291
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY51854.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.64.6e-1835120898
                 -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 ++ l+++ l +pk f+ ++g+++  s + tl++++g +W+v +  +k +g+++l +GW +Fvk++ +++  f+vFk+ ++s+f   v +f+
  GAY51854.1  35 PSILEQKKLKIPKAFVGRFGYEE-LSSDATLKTPNGCVWQVGV--TKDKGKIWLDDGWHHFVKDHSICVAYFLVFKYAKNSTF--DVLIFD 120
                 45566667********9999885.667****************..********************************999998..888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MSKSHVGFSL RCMVMKKMAG NRATEPFRFF RVILPSILEQ KKLKIPKAFV GRFGYEELSS  60
DATLKTPNGC VWQVGVTKDK GKIWLDDGWH HFVKDHSICV AYFLVFKYAK NSTFDVLIFD  120
MTACEIDYPY HRGQPNKEEQ NSIHDDEMQC ENSTKKLGFR ASCKNQMHHS QGSLHYKRLL  180
NGTAGNFSRP SSAVQDDHQT EFVDGQALSA LLEEMGISIS RSCLSLEAEE RQRVITAARL  240
FEPRNPSFMV IVRGNERRKA YLFIPIKFVN NYLCEVPKFI KVQALTEESG PYKPGKDM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-34B3 family protein