PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY51855.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family B3
Protein Properties Length: 276aa    MW: 31668.4 Da    PI: 8.8833
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY51855.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.61.9e-1244984098
                ETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3 40 desgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                +++g +W+v +  +k +g+++l +GW +Fvk++ +++  f+vFk+ ++s+f   v +f+
  GAY51855.1 44 TPNGCVWQVGV--TKDKGKIWLDDGWHHFVKDHSICVAYFLVFKYAKNSTF--DVLIFD 98
                5899*******..********************************999998..888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MSKSHVGFSL RCMVMKKMAG NRATEPFRFF RVILPSILEQ KKLTPNGCVW QVGVTKDKGK  60
IWLDDGWHHF VKDHSICVAY FLVFKYAKNS TFDVLIFDMT ACEIDYPYHR GQPNKEEQNS  120
IHDDEMQCEN STKKLGFRAS CKNQMHHSQG SLHYKRLLNG TAGNFSRPSS AVQDDHQTEF  180
VDGQALSALL EEMGISISRS CLSLEAEERQ RVITAARLFE PRNPSFMVIV RGNERRKAYL  240
FIPIKFVNNY LCEVPKFIKV QALTEESGPY KPGKDM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.14e-26B3 family protein